python main.py Fig.1H_HD9197_CBE-d7_S195_L001_R1_001.fastq.gz out/Fig.1H_HD9197_CBE-d7_S195_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_CBE-d10_S90_L001_R1_001.fastq.gz out/Fig.1H_HD9197_CBE-d10_S90_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_CBE-d13_S198_L001_R1_001.fastq.gz out/Fig.1H_HD9197_CBE-d13_S198_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_CBE-d15_S94_L001_R1_001.fastq.gz out/Fig.1H_HD9197_CBE-d15_S94_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_CBE-d23_S98_L001_R1_001.fastq.gz out/Fig.1H_HD9197_CBE-d23_S98_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_CBE-d26_S201_L001_R1_001.fastq.gz out/Fig.1H_HD9197_CBE-d26_S201_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_CBE-d29_S204_L001_R1_001.fastq.gz out/Fig.1H_HD9197_CBE-d29_S204_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_CBE-d30_S102_L001_R1_001.fastq.gz out/Fig.1H_HD9197_CBE-d30_S102_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_unrelated_d5_S121_L001_R1_001.fastq.gz out/Fig.1H_HD9197_unrelated_d5_S121_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_unrelated_d10_S91_L001_R1_001.fastq.gz out/Fig.1H_HD9197_unrelated_d10_S91_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_unrelated_d15_S95_L001_R1_001.fastq.gz out/Fig.1H_HD9197_unrelated_d15_S95_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_unrelated_d23_S99_L001_R1_001.fastq.gz out/Fig.1H_HD9197_unrelated_d23_S99_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_unrelated_d30_S103_L001_R1_001.fastq.gz out/Fig.1H_HD9197_unrelated_d30_S103_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_UT-d5_S122_L001_R1_001.fastq.gz out/Fig.1H_HD9197_UT-d5_S122_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_UT-d7_S196_L001_R1_001.fastq.gz out/Fig.1H_HD9197_UT-d7_S196_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_UT-d10_S92_L001_R1_001.fastq.gz out/Fig.1H_HD9197_UT-d10_S92_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_UT-d13_S199_L001_R1_001.fastq.gz out/Fig.1H_HD9197_UT-d13_S199_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_UT-d15_S96_L001_R1_001.fastq.gz out/Fig.1H_HD9197_UT-d15_S96_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_UT-d23_S100_L001_R1_001.fastq.gz out/Fig.1H_HD9197_UT-d23_S100_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_UT-d26_S202_L001_R1_001.fastq.gz out/Fig.1H_HD9197_UT-d26_S202_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_UT-d29_S205_L001_R1_001.fastq.gz out/Fig.1H_HD9197_UT-d29_S205_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_HD9197_UT-d30_S104_L001_R1_001.fastq.gz out/Fig.1H_HD9197_UT-d30_S104_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_9197-CBE-d5_S134_L001_R1_001.fastq.gz out/Fig.1H_9197-CBE-d5_S134_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
python main.py Fig.1H_9197-UT-d5_S136_L001_R1_001.fastq.gz out/Fig.1H_9197-UT-d5_S136_L001_R1_001 -a GGGACTGCCGTGCCGGGCGGGAGACCGCCATGGCGACCCTGGAAAAGCTGATGAAGGCCTTCGAGTCCCTCAAGTCCTTC(YAR)CAACAG(CCG)CCACCGCCGCCGCCGCCGCCGCCGCCTCCTCAGCTTCCTCAGCCAAAG -rc --no_trim -amas 80
